applypatch: use "--index" to actually make git-apply write the
changes to the index file.
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@ -58,7 +58,7 @@ echo
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echo Applying "'$SUBJECT'"
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echo
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git-apply $PATCHFILE || exit 1
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git-apply --index $PATCHFILE || exit 1
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tree=$(git-write-tree) || exit 1
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echo Wrote tree $tree
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commit=$(git-commit-tree $tree -p $(cat .git/HEAD) < $final) || exit 1
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