Commit Graph

285 Commits

Author SHA1 Message Date
Junio C Hamano
288ed98bf7 Merge branch 'tb/bloom-improvements'
"git commit-graph write" learned to limit the number of bloom
filters that are computed from scratch with the --max-new-filters
option.

* tb/bloom-improvements:
  commit-graph: introduce 'commitGraph.maxNewFilters'
  builtin/commit-graph.c: introduce '--max-new-filters=<n>'
  commit-graph: rename 'split_commit_graph_opts'
  bloom: encode out-of-bounds filters as non-empty
  bloom/diff: properly short-circuit on max_changes
  bloom: use provided 'struct bloom_filter_settings'
  bloom: split 'get_bloom_filter()' in two
  commit-graph.c: store maximum changed paths
  commit-graph: respect 'commitGraph.readChangedPaths'
  t/helper/test-read-graph.c: prepare repo settings
  commit-graph: pass a 'struct repository *' in more places
  t4216: use an '&&'-chain
  commit-graph: introduce 'get_bloom_filter_settings()'
2020-09-29 14:01:20 -07:00
Junio C Hamano
48794acc50 Merge branch 'ds/maintenance-part-1'
A "git gc"'s big brother has been introduced to take care of more
repository maintenance tasks, not limited to the object database
cleaning.

* ds/maintenance-part-1:
  maintenance: add trace2 regions for task execution
  maintenance: add auto condition for commit-graph task
  maintenance: use pointers to check --auto
  maintenance: create maintenance.<task>.enabled config
  maintenance: take a lock on the objects directory
  maintenance: add --task option
  maintenance: add commit-graph task
  maintenance: initialize task array
  maintenance: replace run_auto_gc()
  maintenance: add --quiet option
  maintenance: create basic maintenance runner
2020-09-25 15:25:38 -07:00
Taylor Blau
809e0327f5 builtin/commit-graph.c: introduce '--max-new-filters=<n>'
Introduce a command-line flag to specify the maximum number of new Bloom
filters that a 'git commit-graph write' is willing to compute from
scratch.

Prior to this patch, a commit-graph write with '--changed-paths' would
compute Bloom filters for all selected commits which haven't already
been computed (i.e., by a previous commit-graph write with '--split'
such that a roll-up or replacement is performed).

This behavior can cause prohibitively-long commit-graph writes for a
variety of reasons:

  * There may be lots of filters whose diffs take a long time to
    generate (for example, they have close to the maximum number of
    changes, diffing itself takes a long time, etc).

  * Old-style commit-graphs (which encode filters with too many entries
    as not having been computed at all) cause us to waste time
    recomputing filters that appear to have not been computed only to
    discover that they are too-large.

This can make the upper-bound of the time it takes for 'git commit-graph
write --changed-paths' to be rather unpredictable.

To make this command behave more predictably, introduce
'--max-new-filters=<n>' to allow computing at most '<n>' Bloom filters
from scratch. This lets "computing" already-known filters proceed
quickly, while bounding the number of slow tasks that Git is willing to
do.

Helped-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-18 10:35:39 -07:00
Taylor Blau
98bb796191 commit-graph: rename 'split_commit_graph_opts'
In the subsequent commit, additional options will be added to the
commit-graph API which have nothing to do with splitting.

Rename the 'split_commit_graph_opts' structure to the more-generic
'commit_graph_opts' to encompass both. Likewise, rename the 'flags'
member to instead be 'split_flags' to clarify that it only has to do
with the behavior implied by '--split'.

Suggested-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-17 21:55:50 -07:00
Taylor Blau
59f0d5073f bloom: encode out-of-bounds filters as non-empty
When a changed-path Bloom filter has either zero, or more than a
certain number (commonly 512) of entries, the commit-graph machinery
encodes it as "missing". More specifically, it sets the indices adjacent
in the BIDX chunk as equal to each other to indicate a "length 0"
filter; that is, that the filter occupies zero bytes on disk.

This has heretofore been fine, since the commit-graph machinery has no
need to care about these filters with too few or too many changed paths.
Both cases act like no filter has been generated at all, and so there is
no need to store them.

In a subsequent commit, however, the commit-graph machinery will learn
to only compute Bloom filters for some commits in the current
commit-graph layer. This is a change from the current implementation
which computes Bloom filters for all commits that are in the layer being
written. Critically for this patch, only computing some of the Bloom
filters means adding a third state for length 0 Bloom filters: zero
entries, too many entries, or "hasn't been computed".

It will be important for that future patch to distinguish between "not
representable" (i.e., zero or too-many changed paths), and "hasn't been
computed". In particular, we don't want to waste time recomputing
filters that have already been computed.

To that end, change how we store Bloom filters in the "computed but not
representable" category:

  - Bloom filters with no entries are stored as a single byte with all
    bits low (i.e., all queries to that Bloom filter will return
    "definitely not")

  - Bloom filters with too many entries are stored as a single byte with
    all bits set high (i.e., all queries to that Bloom filter will
    return "maybe").

These rules are sufficient to not incur a behavior change by changing
the on-disk representation of these two classes. Likewise, no
specification changes are necessary for the commit-graph format, either:

  - Filters that were previously empty will be recomputed and stored
    according to the new rules, and

  - old clients reading filters generated by new clients will interpret
    the filters correctly and be none the wiser to how they were
    generated.

Clients will invoke the Bloom machinery in more cases than before, but
this can be addressed by returning a NULL filter when all bits are set
high. This can be addressed in a future patch.

Note that this does increase the size of on-disk commit-graphs, but far
less than other proposals. In particular, this is generally more
efficient than storing a bitmap for which commits haven't computed their
Bloom filters. Storing a bitmap incurs a penalty of one bit per commit,
whereas storing explicit filters as above incurs a penalty of one byte
per too-large or empty commit.

In practice, these boundary commits likely occupy a small proportion of
the overall number of commits, and so the size penalty is likely smaller
than storing a bitmap for all commits.

See, for example, these relative proportions of such boundary commits
(collected by SZEDER Gábor):

                  |     Percentage of     |    commit-graph   |           |
                  |   commits modifying   |     file size     |           |
                  ├────────┬──────────────┼───────────────────┤    pct.   |
                  | 0 path | >= 512 paths | before  |  after  |   change  |
 ┌────────────────┼────────┼──────────────┼─────────┼─────────┼───────────┤
 | android-base   | 13.20% |        0.13% | 37.468M | 37.534M | +0.1741 % |
 | cmssw          |  0.15% |        0.23% | 17.118M | 17.119M | +0.0091 % |
 | cpython        |  3.07% |        0.01% |  7.967M |  7.971M | +0.0423 % |
 | elasticsearch  |  0.70% |        1.00% |  8.833M |  8.835M | +0.0128 % |
 | gcc            |  0.00% |        0.08% | 16.073M | 16.074M | +0.0030 % |
 | gecko-dev      |  0.14% |        0.64% | 59.868M | 59.874M | +0.0105 % |
 | git            |  0.11% |        0.02% |  3.895M |  3.895M | +0.0020 % |
 | glibc          |  0.02% |        0.10% |  3.555M |  3.555M | +0.0021 % |
 | go             |  0.00% |        0.07% |  3.186M |  3.186M | +0.0018 % |
 | homebrew-cask  |  0.40% |        0.02% |  7.035M |  7.035M | +0.0065 % |
 | homebrew-core  |  0.01% |        0.01% | 11.611M | 11.611M | +0.0002 % |
 | jdk            |  0.26% |        5.64% |  5.537M |  5.540M | +0.0590 % |
 | linux          |  0.01% |        0.51% | 63.735M | 63.740M | +0.0073 % |
 | llvm-project   |  0.12% |        0.03% | 25.515M | 25.516M | +0.0050 % |
 | rails          |  0.10% |        0.10% |  6.252M |  6.252M | +0.0027 % |
 | rust           |  0.07% |        0.17% |  9.364M |  9.364M | +0.0033 % |
 | tensorflow     |  0.09% |        1.02% |  7.009M |  7.010M | +0.0158 % |
 | webkit         |  0.05% |        0.31% | 17.405M | 17.406M | +0.0047 % |

(where the above increase is determined by computing a non-split
commit-graph before and after this patch).

Given that these projects are all "large" by commit count, the storage
cost by writing these filters explicitly is negligible. In the most
extreme example, android-base (which has 494,848 commits at the time of
writing) would have its commit-graph increase by a modest 68.4 KB.

Finally, a test to exercise filters which contain too many changed path
entries will be introduced in a subsequent patch.

Suggested-by: SZEDER Gábor <szeder.dev@gmail.com>
Suggested-by: Jakub Narębski <jnareb@gmail.com>
Helped-by: Derrick Stolee <dstolee@microsoft.com>
Helped-by: SZEDER Gábor <szeder.dev@gmail.com>
Helped-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-17 21:55:50 -07:00
Derrick Stolee
663b2b1b90 maintenance: add commit-graph task
The first new task in the 'git maintenance' builtin is the
'commit-graph' task. This updates the commit-graph file
incrementally with the command

	git commit-graph write --reachable --split

By writing an incremental commit-graph file using the "--split"
option we minimize the disruption from this operation. The default
behavior is to merge layers until the new "top" layer is less than
half the size of the layer below. This provides quick writes most
of the time, with the longer writes following a power law
distribution.

Most importantly, concurrent Git processes only look at the
commit-graph-chain file for a very short amount of time, so they
will verly likely not be holding a handle to the file when we try
to replace it. (This only matters on Windows.)

If a concurrent process reads the old commit-graph-chain file, but
our job expires some of the .graph files before they can be read,
then those processes will see a warning message (but not fail).
This could be avoided by a future update to use the --expire-time
argument when writing the commit-graph.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-17 11:30:05 -07:00
Taylor Blau
9a7a9ed10d bloom: use provided 'struct bloom_filter_settings'
When 'get_or_compute_bloom_filter()' needs to compute a Bloom filter
from scratch, it looks to the default 'struct bloom_filter_settings' in
order to determine the maximum number of changed paths, number of bits
per entry, and so on.

All of these values have so far been constant, and so there was no need
to pass in a pointer from the caller (eg., the one that is stored in the
'struct write_commit_graph_context').

Start passing in a 'struct bloom_filter_settings *' instead of using the
default values to respect graph-specific settings (eg., in the case of
setting 'GIT_TEST_BLOOM_SETTINGS_MAX_CHANGED_PATHS').

In order to have an initialized value for these settings, move its
initialization to earlier in the commit-graph write.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-17 09:31:25 -07:00
Taylor Blau
312cff5207 bloom: split 'get_bloom_filter()' in two
'get_bloom_filter' takes a flag to control whether it will compute a
Bloom filter if the requested one is missing. In the next patch, we'll
add yet another parameter to this method, which would force all but one
caller to specify an extra 'NULL' parameter at the end.

Instead of doing this, split 'get_bloom_filter' into two functions:
'get_bloom_filter' and 'get_or_compute_bloom_filter'. The former only
looks up a Bloom filter (and does not compute one if it's missing,
thus dropping the 'compute_if_not_present' flag). The latter does
compute missing Bloom filters, with an additional parameter to store
whether or not it needed to do so.

This simplifies many call-sites, since the majority of existing callers
to 'get_bloom_filter' do not want missing Bloom filters to be computed
(so they can drop the parameter entirely and use the simpler version of
the function).

While we're at it, instrument the new 'get_or_compute_bloom_filter()'
with counters in the 'write_commit_graph_context' struct which store
the number of filters that we did and didn't compute, as well as filters
that were truncated.

It would be nice to drop the 'compute_if_not_present' flag entirely,
since all remaining callers of 'get_or_compute_bloom_filter' pass it as
'1', but this will change in a future patch and hence cannot be removed.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-17 09:31:25 -07:00
Taylor Blau
97ffa4fab5 commit-graph.c: store maximum changed paths
For now, we assume that there is a fixed constant describing the
maximum number of changed paths we are willing to store in a Bloom
filter.

Prepare for that to (at least partially) not be the case by making it a
member of the 'struct bloom_filter_settings'. This will be helpful in
the subsequent patches by reducing the size of test cases that exercise
storing too many changed paths, as well as preparing for an eventual
future in which this value might change.

This patch alone does not cause newly generated Bloom filters to use
a custom upper-bound on the maximum number of changed paths a single
Bloom filter can hold, that will occur in a later patch.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-17 09:29:22 -07:00
Taylor Blau
b66d84756f commit-graph: respect 'commitGraph.readChangedPaths'
Git uses the 'core.commitGraph' configuration value to control whether
or not the commit graph is used when parsing commits or performing a
traversal.

Now that commit-graphs can also contain a section for changed-path Bloom
filters, administrators that already have commit-graphs may find it
convenient to use those graphs without relying on their changed-path
Bloom filters. This can happen, for example, during a staged roll-out,
or in the event of an incident.

Introduce 'commitGraph.readChangedPaths' to control whether or not Bloom
filters are read. Note that this configuration is independent from both:

  - 'core.commitGraph', to allow flexibility in using all parts of a
    commit-graph _except_ for its Bloom filters.

  - The '--changed-paths' option for 'git commit-graph write', to allow
    reading and writing Bloom filters to be controlled independently.

When the variable is set, pretend as if no Bloom data was specified at
all. This avoids adding additional special-casing outside of the
commit-graph internals.

Suggested-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-09 12:51:48 -07:00
Taylor Blau
ab14d0676c commit-graph: pass a 'struct repository *' in more places
In a future commit, some commit-graph internals will want access to
'r->settings', but we only have the 'struct object_directory *'
corresponding to that repository.

Add an additional parameter to pass the repository around in more
places.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-09 12:51:48 -07:00
Taylor Blau
4f3644056a commit-graph: introduce 'get_bloom_filter_settings()'
Many places in the code often need a pointer to the commit-graph's
'struct bloom_filter_settings', in which case they often take the value
from the top-most commit-graph.

In the non-split case, this works as expected. In the split case,
however, things get a little tricky. Not all layers in a chain of
incremental commit-graphs are required to themselves have Bloom data,
and so whether or not some part of the code uses Bloom filters depends
entirely on whether or not the top-most level of the commit-graph chain
has Bloom filters.

This has been the behavior since Bloom filters were introduced, and has
been codified into the tests since a759bfa9ee (t4216: add end to end
tests for git log with Bloom filters, 2020-04-06). In fact, t4216.130
requires that Bloom filters are not used in exactly the case described
earlier.

There is no reason that this needs to be the case, since it is perfectly
valid for commits in an earlier layer to have Bloom filters when commits
in a newer layer do not.

Since Bloom settings are guaranteed in practice to be the same for any
layer in a chain that has Bloom data, it is sufficient to traverse the
'->base_graph' pointer until either (1) a non-null 'struct
bloom_filter_settings *' is found, or (2) until we are at the root of
the commit-graph chain.

Introduce a 'get_bloom_filter_settings()' function that does just this,
and use it instead of purely dereferencing the top-most graph's
'->bloom_filter_settings' pointer.

While we're at it, add an additional test in t5324 to guard against code
in the commit-graph writing machinery that doesn't correctly handle a
NULL 'struct bloom_filter *'.

Co-authored-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-09 12:51:48 -07:00
Derrick Stolee
665d70ad03 commit-graph: use the "hash version" byte
The commit-graph format reserved a byte among the header of the file to
store a "hash version". During the SHA-256 work, this was not modified
because file formats are not necessarily intended to work across hash
versions. If a repository has SHA-256 as its hash algorithm, it
automatically up-shifts the lengths of object names in all necessary
formats.

However, since we have this byte available for adjusting the version, we
can make the file formats more obviously incompatible instead of relying
on other context from the repository.

Update the oid_version() method in commit-graph.c to add a new value, 2,
for sha-256. This automatically writes the new value in a SHA-256
repository _and_ verifies the value is correct. This is a breaking
change relative to the current 'master' branch since 092b677 (Merge
branch 'bc/sha-256-cvs-svn-updates', 2020-08-13) but it is not breaking
relative to any released version of Git.

The test impact is relatively minor: the output of 'test-tool
read-graph' lists the header information, so those instances of '1' need
to be replaced with a variable determined by GIT_TEST_DEFAULT_HASH. A
more careful test is added that specifically creates a repository of
each type then swaps the commit-graph files. The important value here is
that the "git log" command succeeds while writing a message to stderr.

Helped-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-08-17 16:45:14 -07:00
Junio C Hamano
70cdbbe3a7 Merge branch 'ds/commit-graph-bloom-updates' into master
Updates to the changed-paths bloom filter.

* ds/commit-graph-bloom-updates:
  commit-graph: check all leading directories in changed path Bloom filters
  revision: empty pathspecs should not use Bloom filters
  revision.c: fix whitespace
  commit-graph: check chunk sizes after writing
  commit-graph: simplify chunk writes into loop
  commit-graph: unify the signatures of all write_graph_chunk_*() functions
  commit-graph: persist existence of changed-paths
  bloom: fix logic in get_bloom_filter()
  commit-graph: change test to die on parse, not load
  commit-graph: place bloom_settings in context
2020-07-30 13:20:31 -07:00
Junio C Hamano
de6dda0dc3 Merge branch 'sg/commit-graph-cleanups' into master
The changed-path Bloom filter is improved using ideas from an
independent implementation.

* sg/commit-graph-cleanups:
  commit-graph: simplify write_commit_graph_file() #2
  commit-graph: simplify write_commit_graph_file() #1
  commit-graph: simplify parse_commit_graph() #2
  commit-graph: simplify parse_commit_graph() #1
  commit-graph: clean up #includes
  diff.h: drop diff_tree_oid() & friends' return value
  commit-slab: add a function to deep free entries on the slab
  commit-graph-format.txt: all multi-byte numbers are in network byte order
  commit-graph: fix parsing the Chunk Lookup table
  tree-walk.c: don't match submodule entries for 'submod/anything'
2020-07-30 13:20:30 -07:00
Junio C Hamano
12f5eb9f08 Merge branch 'sg/commit-graph-progress-fix' into master
The code to produce progress output from "git commit-graph --write"
had a few breakages, which have been fixed.

* sg/commit-graph-progress-fix:
  commit-graph: fix "Writing out commit graph" progress counter
  commit-graph: fix progress of reachable commits
2020-07-15 16:29:43 -07:00
Junio C Hamano
24ecfdf206 Merge branch 'tb/fix-persistent-shallow' into master
When "fetch.writeCommitGraph" configuration is set in a shallow
repository and a fetch moves the shallow boundary, we wrote out
broken commit-graph files that do not match the reality, which has
been corrected.

* tb/fix-persistent-shallow:
  commit.c: don't persist substituted parents when unshallowing
2020-07-09 14:00:44 -07:00
SZEDER Gábor
150cd3b61d commit-graph: fix "Writing out commit graph" progress counter
76ffbca71a (commit-graph: write Bloom filters to commit graph file,
2020-04-06) added two delayed progress lines to writing the Bloom
filter index and data chunk.  This is wrong, because a single common
progress is used while writing all chunks, which is not updated while
writing these two new chunks, resulting in incomplete-looking "done"
lines:

  Expanding reachable commits in commit graph: 888679, done.
  Computing commit changed paths Bloom filters: 100% (888678/888678), done.
  Writing out commit graph in 6 passes:  66% (3554712/5332068), done.

Use the common 'struct progress' instance while writing the Bloom
filter chunks as well.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-09 10:28:49 -07:00
SZEDER Gábor
6f9d5f2fda commit-graph: fix progress of reachable commits
To display a progress line while iterating over all refs,
d335ce8f24 (commit-graph.c: show progress of finding reachable
commits, 2020-05-13) should have added a pair of
start_delayed_progress() and stop_progress() calls around a
for_each_ref() invocation.  Alas, the stop_progress() call ended up at
the wrong place, after write_commit_graph(), which does all the
commit-graph computation and writing, and has several progress lines
of its own.  Consequently, that new

  Collecting referenced commits: 123

progress line is overwritten by the first progress line shown by
write_commit_graph(), and its final "done" line is shown last, after
everything is finished:

  Expanding reachable commits in commit graph: 344786, done.
  Computing commit changed paths Bloom filters: 100% (344786/344786), done.
  Collecting referenced commits: 154, done.

Move that stop_progress() call to the right place.

While at it, drop the unnecessary 'if (data.progress)' condition
protecting the stop_progress() call, because that function is prepared
to handle a NULL progress struct.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-09 10:27:23 -07:00
Taylor Blau
ce16364e89 commit.c: don't persist substituted parents when unshallowing
Since 37b9dcabfc (shallow.c: use '{commit,rollback}_shallow_file',
2020-04-22), Git knows how to reset stat-validity checks for the
$GIT_DIR/shallow file, allowing it to change between a shallow and
non-shallow state in the same process (e.g., in the case of 'git fetch
--unshallow').

However, when $GIT_DIR/shallow changes, Git does not alter or remove any
grafts (nor substituted parents) in memory.

This comes up in a "git fetch --unshallow" with fetch.writeCommitGraph
set to true. Ordinarily in a shallow repository (and before 37b9dcabfc,
even in this case), commit_graph_compatible() would return false,
indicating that the repository should not be used to write a
commit-graphs (since commit-graph files cannot represent a shallow
history). But since 37b9dcabfc, in an --unshallow operation that check
succeeds.

Thus even though the repository isn't shallow any longer (that is, we
have all of the objects), the in-core representation of those objects
still has munged parents at the shallow boundaries.  When the
commit-graph write proceeds, we use the incorrect parentage, producing
wrong results.

There are two ways for a user to work around this: either (1) set
'fetch.writeCommitGraph' to 'false', or (2) drop the commit-graph after
unshallowing.

One way to fix this would be to reset the parsed object pool entirely
(flushing the cache and thus preventing subsequent reads from modifying
their parents) after unshallowing. That would produce a problem when
callers have a now-stale reference to the old pool, and so this patch
implements a different approach. Instead, attach a new bit to the pool,
'substituted_parent', which indicates if the repository *ever* stored a
commit which had its parents modified (i.e., the shallow boundary
prior to unshallowing).

This bit needs to be sticky because all reads subsequent to modifying a
commit's parents are unreliable when unshallowing. Modify the check in
'commit_graph_compatible' to take this bit into account, and correctly
avoid generating commit-graphs in this case, thus solving the bug.

Helped-by: Derrick Stolee <dstolee@microsoft.com>
Helped-by: Jonathan Nieder <jrnieder@gmail.com>
Reported-by: Jay Conrod <jayconrod@google.com>
Reviewed-by: Jonathan Nieder <jrnieder@gmail.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-08 16:13:46 -07:00
SZEDER Gábor
2dd4fed927 commit-graph: check chunk sizes after writing
In my experience while experimenting with new commit-graph chunks,
early versions of the corresponding new write_commit_graph_my_chunk()
functions are, sadly but not surprisingly, often buggy, and write more
or less data than they are supposed to, especially if the chunk size
is not directly proportional to the number of commits.  This then
causes all kinds of issues when reading such a bogus commit-graph
file, raising the question of whether the writing or the reading part
happens to be buggy this time.

Let's catch such issues early, already when writing the commit-graph
file, and check that each write_graph_chunk_*() function wrote the
amount of data that it was expected to, and what has been encoded in
the Chunk Lookup table.  Now that all commit-graph chunks are written
in a loop we can do this check in a single place for all chunks, and
any chunks added in the future will get checked as well.

Helped-by: René Scharfe <l.s.r@web.de>
Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-01 14:17:43 -07:00
SZEDER Gábor
17e6275fc9 commit-graph: simplify chunk writes into loop
In write_commit_graph_file() we now have one block of code filling the
array of 'struct chunk_info' with the IDs and sizes of chunks to be
written, and an other block of code calling the functions responsible
for writing individual chunks.  In case of optional chunks like Extra
Edge List an Base Graphs List there is also a condition checking
whether that chunk is necessary/desired, and that same condition is
repeated in both blocks of code. Other, newer chunks have similar
optional conditions.

Eliminate these repeated conditions by storing the function pointers
responsible for writing individual chunks in the 'struct chunk_info'
array as well, and calling them in a loop to write the commit-graph
file.  This will open up the possibility for a bit of foolproofing in
the following patch.

Helped-by: René Scharfe <l.s.r@web.de>
Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-01 14:17:43 -07:00
SZEDER Gábor
9bab081dfa commit-graph: unify the signatures of all write_graph_chunk_*() functions
Update the write_graph_chunk_*() helper functions to have the same
signature:

  - Return an int error code from all these functions.
    write_graph_chunk_base() already has an int error code, now the
    others will have one, too, but since they don't indicate any
    error, they will always return 0.

  - Drop the hash size parameter of write_graph_chunk_oids() and
    write_graph_chunk_data(); its value can be read directly from
    'the_hash_algo' inside these functions as well.

This opens up the possibility for further cleanups and foolproofing in
the following two patches.

Helped-by: René Scharfe <l.s.r@web.de>
Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-01 14:17:43 -07:00
Derrick Stolee
0087a87ba8 commit-graph: persist existence of changed-paths
The changed-path Bloom filters were released in v2.27.0, but have a
significant drawback. A user can opt-in to writing the changed-path
filters using the "--changed-paths" option to "git commit-graph write"
but the next write will drop the filters unless that option is
specified.

This becomes even more important when considering the interaction with
gc.writeCommitGraph (on by default) or fetch.writeCommitGraph (part of
features.experimental). These config options trigger commit-graph writes
that the user did not signal, and hence there is no --changed-paths
option available.

Allow a user that opts-in to the changed-path filters to persist the
property of "my commit-graph has changed-path filters" automatically. A
user can drop filters using the --no-changed-paths option.

In the process, we need to be extremely careful to match the Bloom
filter settings as specified by the commit-graph. This will allow future
versions of Git to customize these settings, and the version with this
change will persist those settings as commit-graphs are rewritten on
top.

Use the trace2 API to signal the settings used during the write, and
check that output in a test after manually adjusting the correct bytes
in the commit-graph file.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-01 14:17:43 -07:00
Derrick Stolee
949197420e bloom: fix logic in get_bloom_filter()
The get_bloom_filter() method is a bit complicated in some parts where
it does not need to be. In particular, it needs to return a NULL filter
only when compute_if_not_present is zero AND the filter data cannot be
loaded from a commit-graph file. This currently happens by accident
because the commit-graph does not load changed-path Bloom filters from
an existing commit-graph when writing a new one. This will change in a
later patch.

Also clean up some style issues while we are here.

One side-effect of returning a NULL filter is that the filters that are
reported as "too large" will now be reported as NULL insead of length
zero. This case was not properly covered before, so add a test. Further,
remote the counting of the zero-length filters from revision.c and the
trace2 logs.

Helped-by: René Scharfe <l.s.r@web.de>
Helped-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-01 14:17:43 -07:00
Derrick Stolee
7b671f8c2b commit-graph: change test to die on parse, not load
43d3561 (commit-graph write: don't die if the existing graph is corrupt,
2019-03-25) introduced the GIT_TEST_COMMIT_GRAPH_DIE_ON_LOAD environment
variable. This was created to verify that commit-graph was not loaded
when writing a new non-incremental commit-graph.

An upcoming change wants to load a commit-graph in some valuable cases,
but we want to maintain that we don't trust the commit-graph data when
writing our new file. Instead of dying on load, instead die if we ever
try to parse a commit from the commit-graph. This functionally verifies
the same intended behavior, but allows a more advanced feature in the
next change.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-23 17:12:08 -07:00
Derrick Stolee
98037f2bf2 commit-graph: place bloom_settings in context
Place an instance of struct bloom_settings into the struct
write_commit_graph_context. This allows simplifying the function
prototype of write_graph_chunk_bloom_data(). This will allow us
to combine the function prototypes and use function pointers to
simplify write_commit_graph_file().

By using a pointer, we can later replace the settings to match those
that exist in the current commit-graph, in case a future Git version
allows customization of these parameters.

Reported-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-23 17:12:08 -07:00
Abhishek Kumar
c752ad09c4 commit-graph: minimize commit_graph_data_slab access
In an earlier patch, multiple struct acccesses to `graph_pos` and
`generation` were auto-converted to multiple method calls.

Since the values are fixed and commit-slab access costly, we would be
better off with storing the values as a local variable and reusing it.

Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-17 14:37:52 -07:00
Abhishek Kumar
c49c82aa4c commit: move members graph_pos, generation to a slab
We remove members `graph_pos` and `generation` from the struct commit.
The default assignments in init_commit_node() are no longer valid,
which is fine as the slab helpers return appropriate default values and
the assignments are removed.

We will replace existing use of commit->generation and commit->graph_pos
by commit_graph_data_slab helpers using
`contrib/coccinelle/commit.cocci'.

Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-17 14:37:30 -07:00
Abhishek Kumar
4844812b9e commit-graph: introduce commit_graph_data_slab
The struct commit is used in many contexts. However, members
`generation` and `graph_pos` are only used for commit-graph related
operations and otherwise waste memory.

This wastage would have been more pronounced as we transition to
generation number v2, which uses 64-bit generation number instead of
current 32-bits.

As they are often accessed together, let's introduce struct
commit_graph_data and move them to a commit_graph_data slab.

While the overall test suite runs just as fast as master,
(series: 26m48s, master: 27m34s, faster by 2.87%), certain commands
like `git merge-base --is-ancestor` were slowed by 40% as discovered
by Szeder Gábor [1]. After minimizing commit-slab access, the slow down
persists but is closer to 20%.

Derrick Stolee believes the slow down is attributable to the underlying
algorithm rather than the slowness of commit-slab access [2] and we will
follow-up in a later series.

[1]: https://lore.kernel.org/git/20200607195347.GA8232@szeder.dev/
[2]: https://lore.kernel.org/git/13db757a-9412-7f1e-805c-8a028c4ab2b1@gmail.com/

Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-17 14:37:23 -07:00
Junio C Hamano
dc57a9be5e Merge branch 'tb/commit-graph-no-check-oids'
Clean-up the commit-graph codepath.

* tb/commit-graph-no-check-oids:
  commit-graph: drop COMMIT_GRAPH_WRITE_CHECK_OIDS flag
  t5318: reorder test below 'graph_read_expect'
  commit-graph.c: simplify 'fill_oids_from_commits'
  builtin/commit-graph.c: dereference tags in builtin
  builtin/commit-graph.c: extract 'read_one_commit()'
  commit-graph.c: peel refs in 'add_ref_to_set'
  commit-graph.c: show progress of finding reachable commits
  commit-graph.c: extract 'refs_cb_data'
2020-06-08 18:06:27 -07:00
SZEDER Gábor
7fbfe07ab4 commit-graph: simplify write_commit_graph_file() #2
Unify the 'chunk_ids' and 'chunk_sizes' arrays into an array of
'struct chunk_info'.  This will allow more cleanups in the following
patches.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-08 12:28:49 -07:00
SZEDER Gábor
bb4d60e5d5 commit-graph: simplify write_commit_graph_file() #1
In write_commit_graph_file() one block of code fills the array of
chunk IDs, another block of code fills the array of chunk offsets,
then the chunk IDs and offsets are written to the Chunk Lookup table,
and finally a third block of code writes the actual chunks.  In case
of optional chunks like Extra Edge List and Base Graphs List there is
also a condition checking whether that chunk is necessary/desired, and
that same condition is repeated in all those three blocks of code.
This patch series is about to add more optional chunks, so there would
be even more repeated conditions.

Those chunk offsets are relative to the beginning of the file, so they
inherently depend on the size of the Chunk Lookup table, which in turn
depends on the number of chunks that are to be written to the
commit-graph file.  IOW at the time we set the first chunk's ID we
can't yet know its offset, because we don't yet know how many chunks
there are.

Simplify this by initially filling an array of chunk sizes, not
offsets, and calculate the offsets based on the chunk sizes only
later, while we are writing the Chunk Lookup table.  This way we can
fill the arrays of chunk IDs and sizes in one go, eliminating one set
of repeated conditions.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-08 12:28:49 -07:00
SZEDER Gábor
5cfa438a76 commit-graph: simplify parse_commit_graph() #2
The Chunk Lookup table stores the chunks' starting offset in the
commit-graph file, not their sizes.  Consequently, the size of a chunk
can only be calculated by subtracting its offset from the offset of
the subsequent chunk (or that of the terminating label).  This is
currenly implemented in a bit complicated way: as we iterate over the
entries of the Chunk Lookup table, we check the id of each chunk and
store its starting offset, then we check the id of the last seen chunk
and calculate its size using its previously saved offset.  At the
moment there is only one chunk for which we calculate its size, but
this patch series will add more, and the repeated chunk id checks are
not that pretty.

Instead let's read ahead the offset of the next chunk on each
iteration, so we can calculate the size of each chunk right away,
right where we store its starting offset.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-08 12:28:49 -07:00
SZEDER Gábor
2ad4f1a7c4 commit-graph: simplify parse_commit_graph() #1
While we iterate over all entries of the Chunk Lookup table we make
sure that we don't attempt to read past the end of the mmap-ed
commit-graph file, and check in each iteration that the chunk ID and
offset we are about to read is still within the mmap-ed memory region.
However, these checks in each iteration are not really necessary,
because the number of chunks in the commit-graph file is already known
before this loop from the just parsed commit-graph header.

So let's check that the commit-graph file is large enough for all
entries in the Chunk Lookup table before we start iterating over those
entries, and drop those per-iteration checks.  While at it, take into
account the size of everything that is necessary to have a valid
commit-graph file, i.e. the size of the header, the size of the
mandatory OID Fanout chunk, and the size of the signature in the
trailer as well.

Note that this necessitates the change of the error message as well,
and, consequently, have to update the 'detect incorrect chunk count'
test in 't5318-commit-graph.sh' as well.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-08 12:28:49 -07:00
SZEDER Gábor
fa7965309e commit-graph: clean up #includes
Our CodingGuidelines says that it's sufficient to include one of
'git-compat-util.h' and 'cache.h', but both 'commit-graph.c' and
'commit-graph.h' include both.  Let's include only 'git-compat-util.h'
to loose a bunch of unnecessary dependencies; but include 'hash.h',
because 'commit-graph.h' does require the definition of 'struct
object_id'.

'commit-graph.h' explicitly includes 'repository.h' and
'string-list.h', but only needs the declaration of a few structs from
them.  Drop these includes and forward-declare the necessary structs
instead.

'commit-graph.c' includes 'dir.h', but doesn't actually use anything
from there, so let's drop that #include as well.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-08 12:28:49 -07:00
SZEDER Gábor
cb9daf16db commit-graph: fix parsing the Chunk Lookup table
The commit-graph file format specifies that the chunks may be in any
order.  However, if the OID Lookup chunk happens to be the last one in
the file, then any command attempting to access the commit-graph data
will fail with:

  fatal: invalid commit position. commit-graph is likely corrupt

In this case the error is wrong, the commit-graph file does conform to
the specification, but the parsing of the Chunk Lookup table is a bit
buggy, and leaves the field holding the number of commits in the
commit-graph zero-initialized.

The number of commits in the commit-graph is determined while parsing
the Chunk Lookup table, by dividing the size of the OID Lookup chunk
with the hash size.  However, the Chunk Lookup table doesn't actually
store the size of the chunks, but it stores their starting offset.
Consequently, the size of a chunk can only be calculated by
subtracting the starting offsets of that chunk from the offset of the
subsequent chunk, or in case of the last chunk from the offset
recorded in the terminating label.  This is currenly implemented in a
bit complicated way: as we iterate over the entries of the Chunk
Lookup table, we check the ID of each chunk and store its starting
offset, then we check the ID of the last seen chunk and calculate its
size using its previously saved offset if necessary (at the moment
it's only necessary for the OID Lookup chunk).  Alas, while parsing
the Chunk Lookup table we only interate through the "real" chunks, but
never look at the terminating label, thus don't even check whether
it's necessary to calulate the size of the last chunk.  Consequently,
if the OID Lookup chunk is the last one, then we don't calculate its
size and turn don't run the piece of code determining the number of
commits in the commit graph, leaving the field holding that number
unchanged (i.e. zero-initialized), eventually triggering the sanity
check in load_oid_from_graph().

Fix this by iterating through all entries in the Chunk Lookup table,
including the terminating label.

Note that this is the minimal fix, suitable for the maintenance track.
A better fix would be to simplify how the chunk sizes are calculated,
but that is a more invasive change, less suitable for 'maint', so that
will be done in later patches.

This additional flexibility of scanning more chunks breaks a test for
"git commit-graph verify" so alter that test to mutate the commit-graph
to have an even lower chunk count.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-06-08 12:28:48 -07:00
Taylor Blau
2f00c355cb commit-graph: drop COMMIT_GRAPH_WRITE_CHECK_OIDS flag
Since 7c5c9b9c57 (commit-graph: error out on invalid commit oids in
'write --stdin-commits', 2019-08-05), the commit-graph builtin dies on
receiving non-commit OIDs as input to '--stdin-commits'.

This behavior can be cumbersome to work around in, say, the case of
piping 'git for-each-ref' to 'git commit-graph write --stdin-commits' if
the caller does not want to cull out non-commits themselves. In this
situation, it would be ideal if 'git commit-graph write' wrote the graph
containing the inputs that did pertain to commits, and silently ignored
the remainder of the input.

Some options have been proposed to the effect of '--[no-]check-oids'
which would allow callers to have the commit-graph builtin do just that.
After some discussion, it is difficult to imagine a caller who wouldn't
want to pass '--no-check-oids', suggesting that we should get rid of the
behavior of complaining about non-commit inputs altogether.

If callers do wish to retain this behavior, they can easily work around
this change by doing the following:

     git for-each-ref --format='%(objectname) %(objecttype) %(*objecttype)' |
     awk '
       !/commit/ { print "not-a-commit:"$1 }
        /commit/ { print $1 }
     ' |
     git commit-graph write --stdin-commits

To make it so that valid OIDs that refer to non-existent objects are
indeed an error after loosening the error handling, perform an extra
lookup to make sure that object indeed exists before sending it to the
commit-graph internals.

Helped-by: Jeff King <peff@peff.net>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-05-18 12:51:11 -07:00
Taylor Blau
0ec2d0ff07 commit-graph.c: simplify 'fill_oids_from_commits'
In the previous handful of commits, both 'git commit-graph write
--reachable' and '--stdin-commits' learned to peel tags down to the
commits which they refer to before passing them into the commit-graph
internals.

This makes the call to 'lookup_commit_reference_gently()' inside of
'fill_oids_from_commits()' a noop, since all OIDs are commits by that
point.

As such, remove the call entirely, as well as the progress meter, which
has been split and moved out to the callers in the aforementioned
earlier commits.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-05-18 12:51:11 -07:00
Taylor Blau
630cd5194e commit-graph.c: peel refs in 'add_ref_to_set'
While iterating references (to discover the set of commits to write to
the commit-graph with 'git commit-graph write --reachable'),
'add_ref_to_set' can save 'fill_oids_from_commits()' some time by
peeling the references beforehand.

Move peeling out of 'fill_oids_from_commits()' and into
'add_ref_to_set()' to use 'peel_ref()' instead of 'deref_tag()'. Doing
so allows the commit-graph machinery to use the peeled value from
'$GIT_DIR/packed-refs' instead of having to load and parse tags.

While we're at it, discard non-commit objects reachable from ref tips.
This would be done automatically by 'fill_oids_from_commits()', but such
functionality will be removed in a subsequent patch after the call to
'lookup_commit_reference_gently' is dropped (at which point a non-commit
object in the commits oidset will become an error).

Suggested-by: Jeff King <peff@peff.net>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-05-13 15:20:45 -07:00
Taylor Blau
d335ce8f24 commit-graph.c: show progress of finding reachable commits
When 'git commit-graph write --reachable' is invoked, the commit-graph
machinery calls 'for_each_ref()' to discover the set of reachable
commits.

Right now the 'add_ref_to_set' callback is not doing anything other than
adding an OID to the set of known-reachable OIDs. In a subsequent
commit, 'add_ref_to_set' will presumptively peel references. This
operation should be fast for repositories with an up-to-date
'$GIT_DIR/packed-refs', but may be slow in the general case.

So that it doesn't appear that 'git commit-graph write' is idling with
'--reachable' in the slow case, add a progress meter to provide some
output in the meantime.

In general, we don't expect a progress meter to appear at all, since
peeling references with a 'packed-refs' file is quick. If it's slow and
we do show a progress meter, the subsequent 'fill_oids_from_commits()'
will be fast, since all of the calls to
'lookup_commit_reference_gently()' will be no-ops.

Both progress meters are delayed, so it is unlikely that more than one
will appear. In either case, this intermediate state will go away in a
handful of patches, at which point there will be at most one progress
meter.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-05-13 15:20:45 -07:00
Junio C Hamano
896833b268 Merge branch 'tb/shallow-cleanup'
Code cleanup.

* tb/shallow-cleanup:
  shallow: use struct 'shallow_lock' for additional safety
  shallow.h: document '{commit,rollback}_shallow_file'
  shallow: extract a header file for shallow-related functions
  commit: make 'commit_graft_pos' non-static
2020-05-13 12:19:18 -07:00
Junio C Hamano
95875e0356 Merge branch 'jt/commit-graph-plug-memleak'
Fix a leak noticed by fuzzer.

* jt/commit-graph-plug-memleak:
  commit-graph: avoid memory leaks
2020-05-08 14:25:05 -07:00
Junio C Hamano
1d7e9c4c4e Merge branch 'tb/commit-graph-perm-bits'
Some of the files commit-graph subsystem keeps on disk did not
correctly honor the core.sharedRepository settings and some were
left read-write.

* tb/commit-graph-perm-bits:
  commit-graph.c: make 'commit-graph-chain's read-only
  commit-graph.c: ensure graph layers respect core.sharedRepository
  commit-graph.c: write non-split graphs as read-only
  lockfile.c: introduce 'hold_lock_file_for_update_mode'
  tempfile.c: introduce 'create_tempfile_mode'
2020-05-05 14:54:28 -07:00
Taylor Blau
1fe10844ca commit-graph.c: extract 'refs_cb_data'
In subsequent patches, we are going to update a progress meter when
'add_ref_to_set()' is called, and need a convenient way to pass a
'struct progress *' in from the caller.

Introduce 'refs_cb_data' as a catch-all for parameters that
'add_ref_to_set' may need, and wrap the existing single parameter in
that struct.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-05-04 23:20:24 -07:00
Jonathan Tan
fbda77c6c0 commit-graph: avoid memory leaks
A fuzzer running on the entry point provided by fuzz-commit-graph.c
revealed a memory leak when parse_commit_graph() creates a struct
bloom_filter_settings and then returns early due to error. Fix that
error by always freeing that struct first (if it exists) before
returning early due to error.

While making that change, I also noticed another possible memory leak -
when the BLOOMDATA chunk is provided but not BLOOMINDEXES. Also fix that
error.

Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-05-04 14:08:38 -07:00
Junio C Hamano
6d56d4c7dc Merge branch 'ds/blame-on-bloom'
"git blame" learns to take advantage of the "changed-paths" Bloom
filter stored in the commit-graph file.

* ds/blame-on-bloom:
  test-bloom: check that we have expected arguments
  test-bloom: fix some whitespace issues
  blame: drop unused parameter from maybe_changed_path
  blame: use changed-path Bloom filters
  tests: write commit-graph with Bloom filters
  revision: complicated pathspecs disable filters
2020-05-01 13:39:54 -07:00
Junio C Hamano
9b6606f43d Merge branch 'gs/commit-graph-path-filter'
Introduce an extension to the commit-graph to make it efficient to
check for the paths that were modified at each commit using Bloom
filters.

* gs/commit-graph-path-filter:
  bloom: ignore renames when computing changed paths
  commit-graph: add GIT_TEST_COMMIT_GRAPH_CHANGED_PATHS test flag
  t4216: add end to end tests for git log with Bloom filters
  revision.c: add trace2 stats around Bloom filter usage
  revision.c: use Bloom filters to speed up path based revision walks
  commit-graph: add --changed-paths option to write subcommand
  commit-graph: reuse existing Bloom filters during write
  commit-graph: write Bloom filters to commit graph file
  commit-graph: examine commits by generation number
  commit-graph: examine changed-path objects in pack order
  commit-graph: compute Bloom filters for changed paths
  diff: halt tree-diff early after max_changes
  bloom.c: core Bloom filter implementation for changed paths.
  bloom.c: introduce core Bloom filter constructs
  bloom.c: add the murmur3 hash implementation
  commit-graph: define and use MAX_NUM_CHUNKS
2020-05-01 13:39:53 -07:00
Junio C Hamano
cf054f817a Merge branch 'tb/commit-graph-fd-exhaustion-fix'
The commit-graph code exhausted file descriptors easily when it
does not have to.

* tb/commit-graph-fd-exhaustion-fix:
  commit-graph: close descriptors after mmap
  commit-graph.c: gracefully handle file descriptor exhaustion
  t/test-lib.sh: make ULIMIT_FILE_DESCRIPTORS available to tests
  commit-graph.c: don't use discarded graph_name in error
2020-05-01 13:39:53 -07:00
Junio C Hamano
6a1c17d05b Merge branch 'tb/commit-graph-split-strategy'
"git commit-graph write" learned different ways to write out split
files.

* tb/commit-graph-split-strategy:
  Revert "commit-graph.c: introduce '--[no-]check-oids'"
  commit-graph.c: introduce '--[no-]check-oids'
  commit-graph.h: replace 'commit_hex' with 'commits'
  oidset: introduce 'oidset_size'
  builtin/commit-graph.c: introduce split strategy 'replace'
  builtin/commit-graph.c: introduce split strategy 'no-merge'
  builtin/commit-graph.c: support for '--split[=<strategy>]'
  t/helper/test-read-graph.c: support commit-graph chains
2020-05-01 13:39:52 -07:00
Taylor Blau
120ad2b0f1 shallow: extract a header file for shallow-related functions
There are many functions in commit.h that are more related to shallow
repositories than they are to any sort of generic commit machinery.
Likely this began when there were only a few shallow-related functions,
and commit.h seemed a reasonable enough place to put them.

But, now there are a good number of shallow-related functions, and
placing them all in 'commit.h' doesn't make sense.

This patch extracts a 'shallow.h', which takes all of the declarations
from 'commit.h' for functions which already exist in 'shallow.c'. We
will bring the remaining shallow-related functions defined in 'commit.c'
in a subsequent patch.

For now, move only the ones that already are implemented in 'shallow.c',
and update the necessary includes.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-30 14:19:13 -07:00
Junio C Hamano
dbd5e0a186 Revert "commit-graph.c: introduce '--[no-]check-oids'"
This reverts commit 7a9ce0269b,
which has not yet gained consensus.
2020-04-29 12:44:40 -07:00
Taylor Blau
45a4365cb6 commit-graph.c: make 'commit-graph-chain's read-only
In a previous commit, we made incremental graph layers read-only by
using 'git_mkstemp_mode' with permissions '0444'.

There is no reason that 'commit-graph-chain's should be modifiable by
the user, since they are generated at a temporary location and then
atomically renamed into place.

To ensure that these files are read-only, too, use
'hold_lock_file_for_update_mode' with the same read-only permission
bits, and let the umask and 'adjust_shared_perm' take care of the rest.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-29 12:35:30 -07:00
Taylor Blau
f4d62847a4 commit-graph.c: ensure graph layers respect core.sharedRepository
Non-layered commit-graphs use 'adjust_shared_perm' to make the
commit-graph file readable (or not) to a combination of the user, group,
and others.

Call 'adjust_shared_perm' for split-graph layers to make sure that these
also respect 'core.sharedRepository'. The 'commit-graph-chain' file
already respects this configuration since it uses
'hold_lock_file_for_update' (which calls 'adjust_shared_perm' eventually
in 'create_tempfile_mode').

Suggested-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-29 12:35:30 -07:00
Taylor Blau
1f9becaedc commit-graph.c: write non-split graphs as read-only
In the previous commit, Git learned 'hold_lock_file_for_update_mode' to
allow the caller to specify the permission bits (prior to further
adjustment by the umask and shared repository permissions) used when
acquiring a temporary file.

Use this in the commit-graph machinery for writing a non-split graph to
acquire an opened temporary file with permissions read-only permissions
to match the split behavior. (In the split case, Git uses
git_mkstemp_mode' for each of the commit-graph layers with permission
bits '0444').

One can notice this discrepancy when moving a non-split graph to be part
of a new chain. This causes a commit-graph chain where all layers have
read-only permission bits, except for the base layer, which is writable
for the current user.

Resolve this discrepancy by using the new
'hold_lock_file_for_update_mode' and passing the desired permission
bits.

Doing so causes some test fallout in t5318 and t6600. In t5318, this
occurs in tests that corrupt a commit-graph file by writing into it. For
these, 'chmod u+w'-ing the file beforehand resolves the issue. The
additional spot in 'corrupt_graph_verify' is necessary because of the
extra 'git commit-graph write' beforehand (which *does* rewrite the
commit-graph file). In t6600, this is caused by copying a read-only
commit-graph file into place and then trying to replace it. For these,
make these files writable.

Helped-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-29 12:35:30 -07:00
Junio C Hamano
25b336421f Merge branch 'ds/commit-graph-expiry-fix'
"git commit-graph write --expire-time=<timestamp>" did not use the
given timestamp correctly, which has been corrected.

* ds/commit-graph-expiry-fix:
  commit-graph: fix buggy --expire-time option
2020-04-28 15:50:02 -07:00
Jeff King
c8828530b7 commit-graph: close descriptors after mmap
We don't ever refer to the descriptor after mmap-ing it. And keeping it
open means we can run out of descriptors in degenerate cases (e.g.,
thousands of split chain files). Let's close it as soon as possible.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-24 22:25:50 -07:00
Taylor Blau
b78a556a6a commit-graph.c: gracefully handle file descriptor exhaustion
When writing a layered commit-graph, the commit-graph machinery uses
'commit_graph_filenames_after' and 'commit_graph_hash_after' to keep
track of the layers in the chain that we are in the process of writing.

When the number of commit-graph layers shrinks, we initialize all
entries in the aforementioned arrays, because we know the structure of
the new commit-graph chain immediately (since there are no new layers,
there are no unknown hash values).

But when the number of commit-graph layers grows (i.e., that
'num_commit_graphs_after > num_commit_graphs_before'), then we leave
some entries in the filenames and hashes arrays as uninitialized,
because we will fill them in later as those values become available.

For instance, we rely on 'write_commit_graph_file's to store the
filename and hash of the last layer in the new chain, which is the one
that it is responsible for writing. But, it's possible that
'write_commit_graph_file' may fail, e.g., from file descriptor
exhaustion. In this case it is possible that 'git_mkstemp_mode' will
fail, and that function will return early *before* setting the values
for the last commit-graph layer's filename and hash.

This causes a number of upleasant side-effects. For instance, trying to
'free()' each entry in 'ctx->commit_graph_filenames_after' (and
similarly for the hashes array) causes us to 'free()' uninitialized
memory, since the area is allocated with 'malloc()' and is therefore
subject to contain garbage (which is left alone when
'write_commit_graph_file' returns early).

This can manifest in other issues, like a general protection fault,
and/or leaving a stray 'commit-graph-chain.lock' around after the
process dies. (The reasoning for this is still a mystery to me, since
we'd otherwise usually expect the kernel to run tempfile.c's 'atexit()'
handlers in the case of a normal death...)

To resolve this, initialize the memory with 'CALLOC_ARRAY' so that
uninitialized entries are filled with zeros, and can thus be 'free()'d
as a noop instead of causing a fault.

Helped-by: Jeff King <peff@peff.net>
Helped-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-23 14:58:52 -07:00
Taylor Blau
a2d57e2280 commit-graph.c: don't use discarded graph_name in error
When writing a commit-graph layer, we do so in a temporary file which is
renamed into place. If we fail to create a temporary file, for e.g.,
because we have too many open files, then 'git_mkstemp_mode' sets the
pattern to the empty string, in which case we get an error something
along the lines of:

  error: unable to create ''

It's not useful to show the pattern here at all, since we (1) know the
pattern is well-formed, and (2) would have already shown the dirname
when trying to create the leading directories. So, replace this error
with something friendlier.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-23 14:58:52 -07:00
Derrick Stolee
b23ea9790d tests: write commit-graph with Bloom filters
The GIT_TEST_COMMIT_GRAPH environment variable updates the commit-
graph file whenever "git commit" is run, ensuring that we always
have an updated commit-graph throughout the test suite. The
GIT_TEST_COMMIT_GRAPH_CHANGED_PATHS environment variable was
introduced to write the changed-path Bloom filters whenever "git
commit-graph write" is run. However, the GIT_TEST_COMMIT_GRAPH
trick doesn't launch a separate process and instead writes it
directly.

To expand the number of tests that have commits in the commit-graph
file, add a helper method that computes the commit-graph and place
that helper inside "git commit" and "git merge".

In the helper method, check GIT_TEST_COMMIT_GRAPH_CHANGED_PATHS
to ensure we are writing changed-path Bloom filters whenever
possible.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-16 15:38:04 -07:00
Taylor Blau
7a9ce0269b commit-graph.c: introduce '--[no-]check-oids'
When operating on a stream of commit OIDs on stdin, 'git commit-graph
write' checks that each OID refers to an object that is indeed a commit.
This is convenient to make sure that the given input is well-formed, but
can sometimes be undesirable.

For example, server operators may wish to feed the refnames that were
updated during a push to 'git commit-graph write --input=stdin-commits',
and silently discard refs that don't point at commits. This can be done
by combing the output of 'git for-each-ref' with '--format
%(*objecttype)', but this requires opening up a potentially large number
of objects.  Instead, it is more convenient to feed the updated refs to
the commit-graph machinery, and let it throw out refs that don't point
to commits.

Introduce '--[no-]check-oids' to make such a behavior possible. With
'--check-oids' (the default behavior to retain backwards compatibility),
'git commit-graph write' will barf on a non-commit line in its input.
With 'no-check-oids', such lines will be silently ignored, making the
above possible by specifying this option.

No matter which is supplied, 'git commit-graph write' retains the
behavior from the previous commit of rejecting non-OID inputs like
"HEAD" and "refs/heads/foo" as before.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-15 09:20:34 -07:00
Taylor Blau
6830c36077 commit-graph.h: replace 'commit_hex' with 'commits'
The 'write_commit_graph()' function takes in either a string list of
pack indices, or a string list of hexadecimal commit OIDs. These
correspond to the '--stdin-packs' and '--stdin-commits' mode(s) from
'git commit-graph write'.

Using a string_list of hexadecimal commit IDs is not the most efficient
use of memory, since we can instead use the 'struct oidset', which is
more well-suited for this case.

This has another benefit which will become apparent in the following
commit. This is that we are about to disambiguate the kinds of errors we
produce with '--stdin-commits' into "non-hex input" and "hex-input, but
referring to a non-commit object". By having 'write_commit_graph' take
in a 'struct oidset *' of commits, we place the burden on the caller (in
this case, the builtin) to handle the first case, and the commit-graph
machinery can handle the second case.

Suggested-by: Jeff King <peff@peff.net>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-15 09:20:30 -07:00
Taylor Blau
8a6ac287b2 builtin/commit-graph.c: introduce split strategy 'replace'
When using split commit-graphs, it is sometimes useful to completely
replace the commit-graph chain with a new base.

For example, consider a scenario in which a repository builds a new
commit-graph incremental for each push. Occasionally (say, after some
fixed number of pushes), they may wish to rebuild the commit-graph chain
with all reachable commits.

They can do so with

  $ git commit-graph write --reachable

but this removes the chain entirely and replaces it with a single
commit-graph in 'objects/info/commit-graph'. Unfortunately, this means
that the next push will have to move this commit-graph into the first
layer of a new chain, and then write its new commits on top.

Avoid such copying entirely by allowing the caller to specify that they
wish to replace the entirety of their commit-graph chain, while also
specifying that the new commit-graph should become the basis of a fresh,
length-one chain.

This addresses the above situation by making it possible for the caller
to instead write:

  $ git commit-graph write --reachable --split=replace

which writes a new length-one chain to 'objects/info/commit-graphs',
making the commit-graph incremental generated by the subsequent push
relatively cheap by avoiding the aforementioned copy.

In order to do this, remove an assumption in 'write_commit_graph_file'
that chains are always at least two incrementals long.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-15 09:20:28 -07:00
Taylor Blau
fdbde82fe5 builtin/commit-graph.c: introduce split strategy 'no-merge'
In the previous commit, we laid the groundwork for supporting different
splitting strategies. In this commit, we introduce the first splitting
strategy: 'no-merge'.

Passing '--split=no-merge' is useful for callers which wish to write a
new incremental commit-graph, but do not want to spend effort condensing
the incremental chain [1]. Previously, this was possible by passing
'--size-multiple=0', but this no longer the case following 63020f175f
(commit-graph: prefer default size_mult when given zero, 2020-01-02).

When '--split=no-merge' is given, the commit-graph machinery will never
condense an existing chain, and it will always write a new incremental.

[1]: This might occur when, for example, a server administrator running
some program after each push may want to ensure that each job runs
proportional in time to the size of the push, and does not "jump" when
the commit-graph machinery decides to trigger a merge.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-15 09:20:27 -07:00
Garima Singh
1217c03e7b commit-graph: reuse existing Bloom filters during write
Add logic to
a) parse Bloom filter information from the commit graph file and,
b) re-use existing Bloom filters.

See Documentation/technical/commit-graph-format for the format in which
the Bloom filter information is written to the commit graph file.

To read Bloom filter for a given commit with lexicographic position
'i' we need to:
1. Read BIDX[i] which essentially gives us the starting index in BDAT for
   filter of commit i+1. It is essentially the index past the end
   of the filter of commit i. It is called end_index in the code.

2. For i>0, read BIDX[i-1] which will give us the starting index in BDAT
   for filter of commit i. It is called the start_index in the code.
   For the first commit, where i = 0, Bloom filter data starts at the
   beginning, just past the header in the BDAT chunk. Hence, start_index
   will be 0.

3. The length of the filter will be end_index - start_index, because
   BIDX[i] gives the cumulative 8-byte words including the ith
   commit's filter.

We toggle whether Bloom filters should be recomputed based on the
compute_if_not_present flag.

Helped-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Garima Singh <garima.singh@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-06 11:08:37 -07:00
Garima Singh
76ffbca71a commit-graph: write Bloom filters to commit graph file
Update the technical documentation for commit-graph-format with
the formats for the Bloom filter index (BIDX) and Bloom filter
data (BDAT) chunks. Write the computed Bloom filters information
to the commit graph file using this format.

Helped-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Garima Singh <garima.singh@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-06 11:08:37 -07:00
Derrick Stolee
b09b785c78 commit-graph: fix buggy --expire-time option
The commit-graph builtin has an --expire-time option that takes a
datetime using OPT_EXPIRY_DATE(). However, the implementation inside
expire_commit_graphs() was treating a non-zero value as a number of
seconds to subtract from "now".

Update t5323-split-commit-graph.sh to demonstrate the correct value
of the --expire-time option by actually creating a crud .graph file
with mtime earlier than the expire time. Instead of using a super-
early time (1980) we use an explicit, and recent, time. Using
test-tool chmtime to create two files on either end of an exact
second, we create a test that catches this failure no matter the
current time. Using a fixed date is more portable than trying to
format a relative date string into the --expiry-date input.

I noticed this when inspecting some Scalar repos that had an excess
number of commit-graph files. In Scalar, we were using this second
interpretation by using "--expire-time=3600" to mean "delete graphs
older than one hour ago" to avoid deleting a commit-graph that a
foreground process may be trying to load.

Also I noticed that the help text was copied from the --max-commits
option. Fix that help text.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-01 14:36:26 -07:00
Garima Singh
3d11275505 commit-graph: examine commits by generation number
When running 'git commit-graph write --changed-paths', we sort the
commits by pack-order to save time when computing the changed-paths
bloom filters. This does not help when finding the commits via the
'--reachable' flag.

If not using pack-order, then sort by generation number before
examining the diff. Commits with similar generation are more likely
to have many trees in common, making the diff faster.

On the Linux kernel repository, this change reduced the computation
time for 'git commit-graph write --reachable --changed-paths' from
3m00s to 1m37s.

Helped-by: Jeff King <peff@peff.net>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Garima Singh <garima.singh@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-03-30 09:59:53 -07:00
Jeff King
d21ee7d111 commit-graph: examine changed-path objects in pack order
Looking at the diff of commit objects in pack order is much faster than
in sha1 order, as it gives locality to the access of tree deltas
(whereas sha1 order is effectively random). Unfortunately the
commit-graph code sorts the commits (several times, sometimes as an oid
and sometimes a pointer-to-commit), and we ultimately traverse in sha1
order.

Instead, let's remember the position at which we see each commit, and
traverse in that order when looking at bloom filters. This drops my time
for "git commit-graph write --changed-paths" in linux.git from ~4
minutes to ~1.5 minutes.

Probably the "--reachable" code path would want something similar.

Or alternatively, we could use a different data structure (either a
hash, or maybe even just a bit in "struct commit") to keep track of
which oids we've seen, etc instead of sorting. And then we could keep
the original order.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Garima Singh <garima.singh@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-03-30 09:59:53 -07:00
Garima Singh
f97b9325f6 commit-graph: compute Bloom filters for changed paths
Add new COMMIT_GRAPH_WRITE_CHANGED_PATHS flag that makes Git compute
Bloom filters for the paths that changed between a commit and it's
first parent, for each commit in the commit-graph.  This computation
is done on a commit-by-commit basis.

We will write these Bloom filters to the commit-graph file, to store
this data on disk, in the next change in this series.

Helped-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Garima Singh <garima.singh@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-03-30 09:59:53 -07:00
Garima Singh
3be7efcafc commit-graph: define and use MAX_NUM_CHUNKS
This is a minor cleanup to make it easier to change
the number of chunks being written to the commit
graph.

Reviewed-by: Jakub Narębski <jnareb@gmail.com>
Signed-off-by: Garima Singh <garima.singh@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-03-30 09:59:52 -07:00
Junio C Hamano
5da7329e29 Merge branch 'rs/commit-graph-code-simplification'
Code simplfication.

* rs/commit-graph-code-simplification:
  commit-graph: use progress title directly
2020-03-05 10:43:04 -08:00
René Scharfe
d68ce906c7 commit-graph: use progress title directly
merge_commit_graphs() copies the (translated) progress message into a
strbuf and passes the copy to start_delayed_progress() at each loop
iteration.  The latter function takes a string pointer, so let's avoid
the detour and hand the string to it directly.  That's shorter, simpler
and slightly more efficient.

Signed-off-by: René Scharfe <l.s.r@web.de>
Acked-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-02-27 09:36:22 -08:00
Taylor Blau
a7df60cac8 commit-graph.h: use odb in 'load_commit_graph_one_fd_st'
Apply a similar treatment as in the previous patch to pass a 'struct
object_directory *' through the 'load_commit_graph_one_fd_st'
initializer, too.

This prevents a potential bug where a pointer comparison is made to a
NULL 'g->odb', which would cause the commit-graph machinery to think
that a pair of commit-graphs belonged to different alternates when in
fact they do not (i.e., in the case of no '--object-dir').

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-02-04 11:36:51 -08:00
Taylor Blau
ad2dd5bb63 commit-graph.c: remove path normalization, comparison
As of the previous patch, all calls to 'commit-graph.c' functions which
perform path normalization (for e.g., 'get_commit_graph_filename()') are
of the form 'ctx->odb->path', which is always in normalized form.

Now that there are no callers passing non-normalized paths to these
functions, ensure that future callers are bound by the same restrictions
by making these functions take a 'struct object_directory *' instead of
a 'const char *'. To match, replace all calls with arguments of the form
'ctx->odb->path' with 'ctx->odb' To recover the path, functions that
perform path manipulation simply use 'odb->path'.

Further, avoid string comparisons with arguments of the form
'odb->path', and instead prefer raw pointer comparisons, which
accomplish the same effect, but are far less brittle.

This has a pleasant side-effect of making these functions much more
robust to paths that cannot be normalized by 'normalize_path_copy()',
i.e., because they are outside of the current working directory.

For example, prior to this patch, Valgrind reports that the following
uninitialized memory read [1]:

  $ ( cd t && GIT_DIR=../.git valgrind git rev-parse HEAD^ )

because 'normalize_path_copy()' can't normalize '../.git' (since it's
relative to but above of the current working directory) [2].

By using a 'struct object_directory *' directly,
'get_commit_graph_filename()' does not need to normalize, because all
paths are relative to the current working directory since they are
always read from the '->path' of an object directory.

[1]: https://lore.kernel.org/git/20191027042116.GA5801@sigill.intra.peff.net.
[2]: The bug here is that 'get_commit_graph_filename()' returns the
     result of 'normalize_path_copy()' without checking the return
     value.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-02-04 11:36:51 -08:00
Taylor Blau
13c2499249 commit-graph.h: store object directory in 'struct commit_graph'
In a previous patch, the 'char *object_dir' in 'struct commit_graph' was
replaced with a 'struct object_directory'. This patch applies the same
treatment to 'struct commit_graph', which is another intermediate step
towards getting rid of all path normalization in 'commit-graph.c'.

Instead of taking a 'char *object_dir', functions that construct a
'struct commit_graph' now take a 'struct object_directory *'. Any code
that needs an object directory path use '->path' instead.

This ensures that all calls to functions that perform path normalization
are given arguments which do not themselves require normalization. This
prepares those functions to drop their normalization entirely, which
will occur in the subsequent patch.

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-02-04 11:36:51 -08:00
Taylor Blau
0bd52e27e3 commit-graph.h: store an odb in 'struct write_commit_graph_context'
There are lots of places in 'commit-graph.h' where a function either has
(or almost has) a full 'struct object_directory *', accesses '->path',
and then throws away the rest of the struct.

This can cause headaches when comparing the locations of object
directories across alternates (e.g., in the case of deciding if two
commit-graph layers can be merged). These paths are normalized with
'normalize_path_copy()' which mitigates some comparison issues, but not
all [1].

Replace usage of 'char *object_dir' with 'odb->path' by storing a
'struct object_directory *' in the 'write_commit_graph_context'
structure. This is an intermediate step towards getting rid of all path
normalization in 'commit-graph.c'.

Resolving a user-provided '--object-dir' argument now requires that we
compare it to the known alternates for equality.  Prior to this patch,
an unknown '--object-dir' argument would silently exit with status zero.

This can clearly lead to unintended behavior, such as verifying
commit-graphs that aren't in a repository's own object store (or one of
its alternates), or causing a typo to mask a legitimate commit-graph
verification failure. Make this error non-silent by 'die()'-ing when the
given '--object-dir' does not match any known alternate object store.

[1]: In my testing, for example, I can get one side of the commit-graph
code to fill object_dir with "./objects" and the other with just
"objects".

Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-02-04 11:36:37 -08:00
Junio C Hamano
037f067587 Merge branch 'ds/commit-graph-set-size-mult'
The code to write split commit-graph file(s) upon fetching computed
bogus value for the parameter used in splitting the resulting
files, which has been corrected.

* ds/commit-graph-set-size-mult:
  commit-graph: prefer default size_mult when given zero
2020-01-06 14:17:51 -08:00
Derrick Stolee
63020f175f commit-graph: prefer default size_mult when given zero
In 50f26bd ("fetch: add fetch.writeCommitGraph config setting",
2019-09-02), the fetch builtin added the capability to write a
commit-graph using the "--split" feature. This feature creates
multiple commit-graph files, and those can merge based on a set
of "split options" including a size multiple. The default size
multiple is 2, which intends to provide a log_2 N depth of the
commit-graph chain where N is the number of commits.

However, I noticed during dogfooding that my commit-graph chains
were becoming quite large when left only to builds by 'git fetch'.
It turns out that in split_graph_merge_strategy(), we default the
size_mult variable to 2 except we override it with the context's
split_opts if they exist. In builtin/fetch.c, we create such a
split_opts, but do not populate it with values.

This problem is due to two failures:

 1. It is unclear that we can add the flag COMMIT_GRAPH_WRITE_SPLIT
    with a NULL split_opts.
 2. If we have a non-NULL split_opts, then we override the default
    values even if a zero value is given.

Correct both of these issues. First, do not override size_mult when
the options provide a zero value. Second, stop creating a split_opts
in the fetch builtin.

Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-01-02 13:46:34 -08:00
Junio C Hamano
41dac79c2f Merge branch 'ds/commit-graph-delay-gen-progress'
One kind of progress messages were always given during commit-graph
generation, instead of following the "if it takes more than two
seconds, show progress" pattern, which has been corrected.

* ds/commit-graph-delay-gen-progress:
  commit-graph: use start_delayed_progress()
  progress: create GIT_PROGRESS_DELAY
2019-12-10 13:11:43 -08:00
Junio C Hamano
d3096d2ba6 Merge branch 'en/doc-typofix'
Docfix.

* en/doc-typofix:
  Fix spelling errors in no-longer-updated-from-upstream modules
  multimail: fix a few simple spelling errors
  sha1dc: fix trivial comment spelling error
  Fix spelling errors in test commands
  Fix spelling errors in messages shown to users
  Fix spelling errors in names of tests
  Fix spelling errors in comments of testcases
  Fix spelling errors in code comments
  Fix spelling errors in documentation outside of Documentation/
  Documentation: fix a bunch of typos, both old and new
2019-12-01 09:04:35 -08:00
Junio C Hamano
0e07c1cd83 Merge branch 'jk/cleanup-object-parsing-and-fsck'
Crufty code and logic accumulated over time around the object
parsing and low-level object access used in "git fsck" have been
cleaned up.

* jk/cleanup-object-parsing-and-fsck: (23 commits)
  fsck: accept an oid instead of a "struct tree" for fsck_tree()
  fsck: accept an oid instead of a "struct commit" for fsck_commit()
  fsck: accept an oid instead of a "struct tag" for fsck_tag()
  fsck: rename vague "oid" local variables
  fsck: don't require an object struct in verify_headers()
  fsck: don't require an object struct for fsck_ident()
  fsck: drop blob struct from fsck_finish()
  fsck: accept an oid instead of a "struct blob" for fsck_blob()
  fsck: don't require an object struct for report()
  fsck: only require an oid for skiplist functions
  fsck: only provide oid/type in fsck_error callback
  fsck: don't require object structs for display functions
  fsck: use oids rather than objects for object_name API
  fsck_describe_object(): build on our get_object_name() primitive
  fsck: unify object-name code
  fsck: require an actual buffer for non-blobs
  fsck: stop checking tag->tagged
  fsck: stop checking commit->parent counts
  fsck: stop checking commit->tree value
  commit, tag: don't set parsed bit for parse failures
  ...
2019-12-01 09:04:28 -08:00
Derrick Stolee
ecc0869080 commit-graph: use start_delayed_progress()
When writing a commit-graph, we show progress along several commit
walks. When we use start_delayed_progress(), the progress line will
only appear if that step takes a decent amount of time.

However, one place was missed: computing generation numbers. This is
normally a very fast operation as all commits have been parsed in a
previous step. But, this is showing up for all users no matter how few
commits are being added.

The tests that check for the progress output have already been updated
to use GIT_PROGRESS_DELAY=0 to force the expected output.

Helped-by: Jeff King <peff@peff.net>
Reported-by: ryenus <ryenus@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-11-27 10:57:10 +09:00
Elijah Newren
15beaaa3d1 Fix spelling errors in code comments
Reported-by: Jens Schleusener <Jens.Schleusener@fossies.org>
Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-11-10 16:00:54 +09:00
Junio C Hamano
dac1d83c91 Merge branch 'ds/commit-graph-on-fetch'
Regression fix.

* ds/commit-graph-on-fetch:
  commit-graph: fix writing first commit-graph during fetch
  t5510-fetch.sh: demonstrate fetch.writeCommitGraph bug
2019-11-04 13:33:06 +09:00
Jeff King
228c78fbd4 commit, tag: don't set parsed bit for parse failures
If we can't parse a commit, then parse_commit() will return an error
code. But it _also_ sets the "parsed" flag, which tells us not to bother
trying to re-parse the object. That means that subsequent parses have no
idea that the information in the struct may be bogus.  I.e., doing this:

  parse_commit(commit);
  ...
  if (parse_commit(commit) < 0)
          die("commit is broken");

will never trigger the die(). The second parse_commit() will see the
"parsed" flag and quietly return success.

There are two obvious ways to fix this:

  1. Stop setting "parsed" until we've successfully parsed.

  2. Keep a second "corrupt" flag to indicate that we saw an error (and
     when the parsed flag is set, return 0/-1 depending on the corrupt
     flag).

This patch does option 1. The obvious downside versus option 2 is that
we might continually re-parse a broken object. But in practice,
corruption like this is rare, and we typically die() or return an error
in the caller. So it's OK not to worry about optimizing for corruption.
And it's much simpler: we don't need to use an extra bit in the object
struct, and callers which check the "parsed" flag don't need to learn
about the corrupt bit, too.

There's no new test here, because this case is already covered in t5318.
Note that we do need to update the expected message there, because we
now detect the problem in the return from "parse_commit()", and not with
a separate check for a NULL tree. In fact, we can now ditch that
explicit tree check entirely, as we're covered robustly by this change
(and the previous recent change to treat a NULL tree as a parse error).

We'll also give tags the same treatment. I don't know offhand of any
cases where the problem can be triggered (it implies somebody ignoring a
parse error earlier in the process), but consistently returning an error
should cause the least surprise.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-10-28 14:04:49 +09:00
Derrick Stolee
cb99a34e23 commit-graph: fix writing first commit-graph during fetch
The previous commit includes a failing test for an issue around
fetch.writeCommitGraph and fetching in a repo with a submodule. Here, we
fix that bug and set the test to "test_expect_success".

The problem arises with this set of commands when the remote repo at
<url> has a submodule. Note that --recurse-submodules is not needed to
demonstrate the bug.

	$ git clone <url> test
	$ cd test
	$ git -c fetch.writeCommitGraph=true fetch origin
	Computing commit graph generation numbers: 100% (12/12), done.
	BUG: commit-graph.c:886: missing parent <hash1> for commit <hash2>
	Aborted (core dumped)

As an initial fix, I converted the code in builtin/fetch.c that calls
write_commit_graph_reachable() to instead launch a "git commit-graph
write --reachable --split" process. That code worked, but is not how we
want the feature to work long-term.

That test did demonstrate that the issue must be something to do with
internal state of the 'git fetch' process.

The write_commit_graph() method in commit-graph.c ensures the commits we
plan to write are "closed under reachability" using close_reachable().
This method walks from the input commits, and uses the UNINTERESTING
flag to mark which commits have already been visited. This allows the
walk to take O(N) time, where N is the number of commits, instead of
O(P) time, where P is the number of paths. (The number of paths can be
exponential in the number of commits.)

However, the UNINTERESTING flag is used in lots of places in the
codebase. This flag usually means some barrier to stop a commit walk,
such as in revision-walking to compare histories. It is not often
cleared after the walk completes because the starting points of those
walks do not have the UNINTERESTING flag, and clear_commit_marks() would
stop immediately.

This is happening during a 'git fetch' call with a remote. The fetch
negotiation is comparing the remote refs with the local refs and marking
some commits as UNINTERESTING.

I tested running clear_commit_marks_many() to clear the UNINTERESTING
flag inside close_reachable(), but the tips did not have the flag, so
that did nothing.

It turns out that the calculate_changed_submodule_paths() method is at
fault. Thanks, Peff, for pointing out this detail! More specifically,
for each submodule, the collect_changed_submodules() runs a revision
walk to essentially do file-history on the list of submodules. That
revision walk marks commits UNININTERESTING if they are simplified away
by not changing the submodule.

Instead, I finally arrived on the conclusion that I should use a flag
that is not used in any other part of the code. In commit-reach.c, a
number of flags were defined for commit walk algorithms. The REACHABLE
flag seemed like it made the most sense, and it seems it was not
actually used in the file. The REACHABLE flag was used in early versions
of commit-reach.c, but was removed by 4fbcca4 (commit-reach: make
can_all_from_reach... linear, 2018-07-20).

Add the REACHABLE flag to commit-graph.c and use it instead of
UNINTERESTING in close_reachable(). This fixes the bug in manual
testing.

Reported-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Helped-by: Jeff King <peff@peff.net>
Helped-by: Szeder Gábor <szeder.dev@gmail.com>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-10-25 11:19:16 +09:00
Junio C Hamano
6e12570822 Merge branch 'ah/cleanups'
Miscellaneous code clean-ups.

* ah/cleanups:
  git_mkstemps_mode(): replace magic numbers with computed value
  wrapper: use a loop instead of repetitive statements
  diffcore-break: use a goto instead of a redundant if statement
  commit-graph: remove a duplicate assignment
2019-10-09 14:01:00 +09:00
Junio C Hamano
80693e3f09 Merge branch 'tb/commit-graph-harden'
The code to parse and use the commit-graph file has been made more
robust against corrupted input.

* tb/commit-graph-harden:
  commit-graph.c: handle corrupt/missing trees
  commit-graph.c: handle commit parsing errors
  t/t5318: introduce failing 'git commit-graph write' tests
2019-10-07 11:32:58 +09:00
Junio C Hamano
caf150ce7d Merge branch 'gs/commit-graph-progress'
* gs/commit-graph-progress:
  commit-graph: add --[no-]progress to write and verify
2019-10-07 11:32:57 +09:00
Junio C Hamano
1398171378 Merge branch 'rs/commit-graph-use-list-count'
Code cleanup.

* rs/commit-graph-use-list-count:
  commit-graph: use commit_list_count()
2019-10-07 11:32:57 +09:00
Junio C Hamano
098e8c6716 Merge branch 'jk/disable-commit-graph-during-upload-pack'
The "upload-pack" (the counterpart of "git fetch") needs to disable
commit-graph when responding to a shallow clone/fetch request, but
the way this was done made Git panic, which has been corrected.

* jk/disable-commit-graph-during-upload-pack:
  upload-pack: disable commit graph more gently for shallow traversal
  commit-graph: bump DIE_ON_LOAD check to actual load-time
2019-10-07 11:32:55 +09:00
Junio C Hamano
cda8faa37e Merge branch 'jk/commit-graph-cleanup'
A pair of small fixups to "git commit-graph" have been applied.

* jk/commit-graph-cleanup:
  commit-graph: turn off save_commit_buffer
  commit-graph: don't show progress percentages while expanding reachable commits
2019-10-07 11:32:55 +09:00
Alex Henrie
8da02ce62a commit-graph: remove a duplicate assignment
Leave the variable 'g' uninitialized before it is set just before its
first use in front of a loop, which is a much more appropriate place to
indicate what it is used for.

Also initialize the variable 'num_commits' just before the loop instead
of at the beginning of the function for the same reason.

Reviewed-by: Derrick Stolee <stolee@gmail.com>
Signed-off-by: Alex Henrie <alexhenrie24@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-10-02 15:04:16 +09:00
Garima Singh
7371612255 commit-graph: add --[no-]progress to write and verify
Add --[no-]progress to git commit-graph write and verify.
The progress feature was introduced in 7b0f229
("commit-graph write: add progress output", 2018-09-17) but
the ability to opt-out was overlooked.

Signed-off-by: Garima Singh <garima.singh@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-09-18 14:23:09 -07:00
René Scharfe
689a146c91 commit-graph: use commit_list_count()
Let commit_list_count() count the number of parents instead of
duplicating it.  Also store the result in an unsigned int, as that's
what the function returns, and the count is never negative.

Signed-off-by: René Scharfe <l.s.r@web.de>
Acked-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-09-16 13:00:50 -07:00
Jeff King
6abada1880 upload-pack: disable commit graph more gently for shallow traversal
When the client has asked for certain shallow options like
"deepen-since", we do a custom rev-list walk that pretends to be
shallow. Before doing so, we have to disable the commit-graph, since it
is not compatible with the shallow view of the repository. That's
handled by 829a321569 (commit-graph: close_commit_graph before shallow
walk, 2018-08-20). That commit literally closes and frees our
repo->objects->commit_graph struct.

That creates an interesting problem for commits that have _already_ been
parsed using the commit graph. Their commit->object.parsed flag is set,
their commit->graph_pos is set, but their commit->maybe_tree may still
be NULL. When somebody later calls repo_get_commit_tree(), we see that
we haven't loaded the tree oid yet and try to get it from the commit
graph. But since it has been freed, we segfault!

So the root of the issue is a data dependency between the commit's
lazy-load of the tree oid and the fact that the commit graph can go
away mid-process. How can we resolve it?

There are a couple of general approaches:

  1. The obvious answer is to avoid loading the tree from the graph when
     we see that it's NULL. But then what do we return for the tree oid?
     If we return NULL, our caller in do_traverse() will rightly
     complain that we have no tree. We'd have to fallback to loading the
     actual commit object and re-parsing it. That requires teaching
     parse_commit_buffer() to understand re-parsing (i.e., not starting
     from a clean slate and not leaking any allocated bits like parent
     list pointers).

  2. When we close the commit graph, walk through the set of in-memory
     objects and clear any graph_pos pointers. But this means we also
     have to "unparse" any such commits so that we know they still need
     to open the commit object to fill in their trees. So it's no less
     complicated than (1), and is more expensive (since we clear objects
     we might not later need).

  3. Stop freeing the commit-graph struct. Continue to let it be used
     for lazy-loads of tree oids, but let upload-pack specify that it
     shouldn't be used for further commit parsing.

  4. Push the whole shallow rev-list out to its own sub-process, with
     the commit-graph disabled from the start, giving it a clean memory
     space to work from.

I've chosen (3) here. Options (1) and (2) would work, but are
non-trivial to implement. Option (4) is more expensive, and I'm not sure
how complicated it is (shelling out for the actual rev-list part is
easy, but we do then parse the resulting commits internally, and I'm not
clear which parts need to be handling shallow-ness).

The new test in t5500 triggers this segfault, but see the comments there
for how horribly intimate it has to be with how both upload-pack and
commit graphs work.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-09-12 12:30:08 -07:00
Jeff King
fbab552a53 commit-graph: bump DIE_ON_LOAD check to actual load-time
Commit 43d3561805 (commit-graph write: don't die if the existing graph
is corrupt, 2019-03-25) added an environment variable we use only in the
test suite, $GIT_TEST_COMMIT_GRAPH_DIE_ON_LOAD. But it put the check for
this variable at the very top of prepare_commit_graph(), which is called
every time we want to use the commit graph. Most importantly, it comes
_before_ we check the fast-path "did we already try to load?", meaning
we end up calling getenv() for every single use of the commit graph,
rather than just when we load.

getenv() is allowed to have unexpected side effects, but that shouldn't
be a problem here; we're lazy-loading the graph so it's clear that at
least _one_ invocation of this function is going to call it.

But it is inefficient. getenv() typically has to do a linear search
through the environment space.

We could memoize the call, but it's simpler still to just bump the check
down to the actual loading step. That's fine for our sole user in t5318,
and produces this minor real-world speedup:

  [before]
  Benchmark #1: git -C linux rev-list HEAD >/dev/null
    Time (mean ± σ):      1.460 s ±  0.017 s    [User: 1.174 s, System: 0.285 s]
    Range (min … max):    1.440 s …  1.491 s    10 runs

  [after]
  Benchmark #1: git -C linux rev-list HEAD >/dev/null
    Time (mean ± σ):      1.391 s ±  0.005 s    [User: 1.118 s, System: 0.273 s]
    Range (min … max):    1.385 s …  1.399 s    10 runs

Of course that actual speedup depends on how big your environment is. We
can game it like this:

  for i in $(seq 10000); do
    export dummy$i=$i
  done

in which case I get:

  [before]
  Benchmark #1: git -C linux rev-list HEAD >/dev/null
    Time (mean ± σ):      6.257 s ±  0.061 s    [User: 6.005 s, System: 0.250 s]
    Range (min … max):    6.174 s …  6.337 s    10 runs

  [after]
  Benchmark #1: git -C linux rev-list HEAD >/dev/null
  Time (mean ± σ):      1.403 s ±  0.005 s    [User: 1.146 s, System: 0.256 s]
  Range (min … max):    1.396 s …  1.412 s    10 runs

So this is really more about avoiding the pathological case than
providing a big real-world speedup.

Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-09-12 12:29:58 -07:00
Junio C Hamano
f4f8dfe127 Merge branch 'ds/feature-macros'
A mechanism to affect the default setting for a (related) group of
configuration variables is introduced.

* ds/feature-macros:
  repo-settings: create feature.experimental setting
  repo-settings: create feature.manyFiles setting
  repo-settings: parse core.untrackedCache
  commit-graph: turn on commit-graph by default
  t6501: use 'git gc' in quiet mode
  repo-settings: consolidate some config settings
2019-09-09 12:26:36 -07:00
SZEDER Gábor
67fa6aac5a commit-graph: don't show progress percentages while expanding reachable commits
Commit 49bbc57a57 (commit-graph write: emit a percentage for all
progress, 2019-01-19) was a bit overeager when it added progress
percentages to the "Expanding reachable commits in commit graph" phase
as well, because most of the time the number of commits that phase has
to iterate over is not known in advance and grows significantly, and,
consequently, we end up with nonsensical numbers:

  $ git commit-graph write --reachable
  Expanding reachable commits in commit graph: 138606% (824706/595), done.
  [...]

  $ git rev-parse v5.0 | git commit-graph write --stdin-commits
  Expanding reachable commits in commit graph: 81264400% (812644/1), done.
  [...]

Even worse, because the percentage grows so quickly, the progress code
outputs much more often than it should (because it ticks every second,
or every 1%), slowing the whole process down. My time for "git
commit-graph write --reachable" on linux.git went from 13.463s to
12.521s with this patch, ~7% savings.

Therefore, don't show progress percentages in the "Expanding reachable
commits in commit graph" phase.

Note that the current code does sometimes do the right thing, if we
picked up all commits initially (e.g., omitting "--reachable" in a
fully-packed repository would get the correct count without any parent
traversal). So it may be possible to come up with a way to tell when we
could use a percentage here. But in the meantime, let's make sure we
robustly avoid printing nonsense.

Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2019-09-09 10:56:43 -07:00