Because a deletion of ref would need to remove it from both the
loose ref store and the packed ref store, a delete-ref operation
that logically removes one ref may end up invoking ref-transaction
hook twice, which has been corrected.
* ps/avoid-unnecessary-hook-invocation-with-packed-refs:
refs: skip hooks when deleting uncovered packed refs
refs: do not execute reference-transaction hook on packing refs
refs: demonstrate excessive execution of the reference-transaction hook
refs: allow skipping the reference-transaction hook
refs: allow passing flags when beginning transactions
refs: extract packed_refs_delete_refs() to allow control of transaction